7.4: Two Dimensional Heteronuclear NMR Spectroscopy (2024)

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    Learning Objectives
    • Understand what HSQC is and when to use it
    • Understand what HMBCis and when to use it

    The previous section discussed the correlation of 1H to 1H, but those are not the only NMR active nuclei in a molecule. Heteronculear 2-D NMR is the correlation between different nuclei, such as a 1H to 13C and heteronuclear2-DNMR is especially important in biological chemistry, especially in the elucidation of the three-dimensional structure of proteins.

    Heteronuclear Single Quantum Coherence

    Hetereonuclear Single Quantum Coherence (HSQC) is used to determine the proton to carbon or heteroatom(often nitrogen) single bond correlations. It is also known as heteronuclear multiple quantum coherence (HMQC). While the DEPT may give the same information for 13C to 1H correlations, HSQC is more sensitive, therefore, it may be more adventageous to use this type of experiment in complex situations. In an HSQC experiment, polarization is transferred from a 1H nuclei to a neighboring heteroatom (13C or 15N). This polaraization is then transferred back to the 1H nuclei. The signal from the 1H nuclei is recorded.The pulse sequence for a typical HSQC experiment is detailed below involving1H and15N nuclei.

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (1)

    In an HSQC spectrum, a13Cor heteroatom spectrumis displayed on one axis and a1H spectrum is displayed on the other axis. Cross-peaks show which proton is attached to which carbon or heteroatom. The purpose of a HSQC is to determine which protons are coupled to what other specific carbon or heteroatom in the molecule through bonds.

    Example \(\PageIndex{1}\)

    The HSQC of propyl acetate is below:

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (2)

    Assign which hydrogens are attached to which carbons.

    Solution

    An HSQC experiment spreads things out into two dimensions just like the hom*onuclear experiments did in the previous section. Looking along the x axis, we the 1H NMR spectrum and along the y axis we see the 13C NMR spectrum displayed. The peak at 171 ppm in the 13C has no cross peak. This means that this carbon does not have any hydrogens attached, therefore, this is our carbonyl carbon. The peak at 77 ppm is residual solvent, in this case CDCl3. The cross peak at (3.9, 66) is a methylene attached to a carbon that is attached to an electron-withdrawing group. If you look at a 13C data table, then you can see where different carbon groups show up. In propyl acetate, oxygen is the most electron withdrawing group, so the piece we have at this cross peak is -CH2-O. The cross peak at (2.0, 21.8) is the methyl group that has no coupling neighboring hydrogens. The next cross peak at (1.6, 20.8) is a methylene group, The final cross peak is (0.9, 10.2) is a methyl group.

    Another example HSCQ spectrum from ubiquitin is shown below.

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (3)
    1H15N HSQC spectrum of ubiquitin

    Notice the greater clarity of spectra of the HSQCexperiment. This is a strong advantage of heteronuclear NMR. In this diagram, each peak corresponds to a cross peak, showing coupling between sets of1H and15N nuclei. Each peak represents the15N—1H of a unique amino acid along the backbone of the amino acid.

    Heteronuclear Multiple Bond Correlation(HMBC)

    Hetereonuclear Multiple Bond Correlation (HMBC) is used to determine long range 1H to 13C connectivity. This experiment gives the correlation between 1H and 13Cwhen separated by two, three, and even four (if through a conjugated system) bonds away. In an HSQC experiment, direct one bond correlations are suppressed as part of the sequence and like HSQC is proton detected.The time delay in the pulse sequence can be optimized for different coupling constants, J. The signal from the 1H nuclei is recorded.The spectra of HSQC give rise to cross peaks thatcorrelate one nuclei to another. These correlations helpdetermine which protons are coupled to what other specific heteroatommore than one bond away.

    Example \(\PageIndex{2}\)

    Below is the HMBC of propyl acetate:

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (4)

    Does the HMBC corroborate with the structure of propyl acetate?

    Solution

    Yes! While propyl acetate is a simpler structure than typically analyzed by 2D NMR spectroscopy, it helps illuminate how to read the spectra and what information to gather from it. By using the HSQC (above), we already know which hydrogen(s) are directly attached to which carbons. The cross peaks here indicate what other carbons are attached beyond one bond away. Below is propyl acetate with the atoms labeled:

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (5)

    Focus on a column from one hydrogen peak. If we start with the 0.9 ppm methyl group (6), there are two cross peaks in the column (09., 20.8) and (0.9, 65.9). These correspond to a methylene group (5) and the methylene group attached to the oxygen (4). If we move the the methylene (5) at 1.6 ppm, then it has two cross peaks that correspond to C6 and C4. The methyl (1) at 2 ppm has not shown any correlations in previous spectra, but in HMBC there is a cross peak. The methyl (1) is attached to the carbonyl carbon (2). Finally,the methylene at 3.9 ppm has 3 cross peaks. It shows that it is connected through bonds to a methyl (6), a methylene (5), and the carbonyl carbon (2). All of this does match the structure for propyl acetate.

    Exercise \(\PageIndex{1}\)

    Analyze the data to determine which of the two isomers (below) we are dealing with.

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (6)or7.4: Two Dimensional Heteronuclear NMR Spectroscopy (7)

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (8)

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (9)

    Answer

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (10)

    Exercise \(\PageIndex{2}\)

    What type of information do you get from:

    1. HSQC?
    2. HMBC?
    Answer

    1. HSQCdetermines the proton-carbon single bond correlations. It could also be other heteroatoms to hydrogen single bonds.

    2. HMBC gives the correlations between carbon and hydrogen separated by 2 to 4 bonds away. This gives more information about connectivity within the molecule.

    References

    Silverstein, R.M, Webster, F.X, and Kiemle D.J. Spectrometric Identification of Organic Compounds. 7th ed. John Wiley & Sons, Inc. 2005.

    7.4: Two Dimensional Heteronuclear NMR Spectroscopy (2024)

    FAQs

    What is heteronuclear NMR spectroscopy? ›

    In subject area: Chemistry. HETCOR spectroscopy is a classic two-dimensional NMR correlation technique developed to probe short-range correlations and distances between heteronuclei, and is very popular in liquid-state NMR spectroscopy.

    What is two-dimensional NMR spectroscopy techniques? ›

    The two dimensions of a two-dimensional NMR experiment are two frequency axes representing a chemical shift. Each frequency axis is associated with one of the two time variables, which are the length of the evolution period (the evolution time) and the time elapsed during the detection period (the detection time).

    What is the advantage of 2D NMR over 1D NMR? ›

    As previously mentioned, the major advantage of 2D NMR over 1D NMR is the ability to distinguish between the overlapping signals that exist in larger molecules. Heteronuclear two-dimensional NMR is especially important in biological chemistry in the elucidation of the three-dimensional structure of proteins.

    What does HMBC NMR tell you? ›

    The HMBC (Heteronuclear Multiple Bond Correlation) experiment gives correlations between carbons and protons that are separated by two, three, and, sometimes in conjugated systems, four bonds. Direct one-bond correlations are suppressed. This gives connectivity information much like a proton-proton COSY.

    What does NMR spectroscopy tell you? ›

    Nuclear Magnetic Resonance (NMR) interpretation plays a pivotal role in molecular identifications. As interpreting NMR spectra, the structure of an unknown compound, as well as known structures, can be assigned by several factors such as chemical shift, spin multiplicity, coupling constants, and integration.

    What are the two types of NMR spectroscopy? ›

    There are two types of NMR spectroscopy- 1H (or proton) and C-13 NMR. Proton NMR relies upon the 1-H isotope of hydrogen, while C-13 NMR relies upon the 13-C isotope of carbon.

    What are the disadvantages of 2D NMR? ›

    Disadvantage : -The intense peak sometimes may get obscured by cross-peaks in 2D NMR. -The 2D NMR consists ofdifferent phases of cross and diagonal peak multi-pet. -The analysis and interpretation of 2D NMR is complex as compared to one dimensional NMR.

    Why do we need 2D NMR? ›

    2D NMR spectroscopy can be used to probe specific NMR interactions selectively. Spreading out the spectrum in two dimensions has the advantage for large molecules that it removes much peak overlap. While the simple vector model may be used to explain some 2D experiments, it is unable to explain 2D techniques.

    Is NMR 2D or 3D? ›

    Three-dimensional (3D) NMR experiment can be generated by NMR experiments consisting of two sequential 2D experiments or through the implementation of triple resonance experiments.

    What is the difference between one-dimensional and two-dimensional NMR spectroscopy? ›

    The main advantage of 2D NMR spectroscopy compared to 1D spectroscopy is that it uncovers signals that are overlapping in 1D NMR spectroscopy due to similar resonant frequencies. It can be applied to a variety of biomolecules, most notably to metabolites and proteins.

    What are the weaknesses of NMR? ›

    • A common limitation is the low sensitivity of NMR instruments to insufficient sample concentrations, which leads to poor spectra. ...
    • NMR instruments and their maintenance are expensive because they require large and powerful magnets as energy sources and cryogenic liquids for cooling.
    Aug 1, 2023

    Why is NMR better than mass spectrometry? ›

    NMR technology provides a fast method for analyzing metabolites. NMR analysis is also less expensive when compared to MS analysis because NMR analysis requires no reference compounds for labeling. The labeling standards compounds are costly, and they make MS more expensive.

    Is HMBC 2 or 3 bonds? ›

    HMBC provides correlations between carbons that are mainly separated by two or three bonds. However, it does not distinguish between these two possibilities. This can lead to ambiguities in structure elucidation.

    How many scans for HMBC? ›

    For an HMBC at this concentration we recommend 8 scans per increment and no NUS anymore.

    What are the examples of 2D NMR? ›

    In a 2D-NMR experiment, magnetization transfer is measured. Sometimes this occurs through bonds to the same type of nucleus such as in COSY, TOCSY and INADEQUATE or to another type of nucleus such as in HSQC and HMBC or through space such as in NOESY and ROESY.

    What is the difference between heteronuclear and hom*onuclear? ›

    hom*onuclear diatomic molecules are composed of two atoms of the same element, like in the case of oxygen and nitrogen shown in the illustration here. Heteronuclear diatomic molecules are composed of two atoms of different elements, like in the case of hydrochloric acid and carbon monoxide.

    What do you mean by heteronuclear? ›

    A heteronuclear molecule is a molecule composed of atoms of more than one chemical element. For example, a molecule of water (H2O) is heteronuclear because it has atoms of two different elements, hydrogen (H) and oxygen (O).

    What is the heteronuclear bonding? ›

    Diatomic molecules with two non-identical atoms are called heteronuclear diatomic molecules. When atoms are not identical, the molecule forms by combining atomic orbitals of unequal energies. The result is a polar bond in which atomic orbitals contribute unevenly to each molecular orbital.

    What is the difference between heteronuclear molecules and compounds? ›

    All compounds are heteronuclear because the definition of a compound requires it to be composed of at least two different elements (heteronuclear). But not all compounds are molecules. So NaCl certainly is heteronuclear, but not a molecule because it is ionic rather than covalent. So not a heteronuclear molecule.

    References

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